Source code for geobench_v2.datamodules.benv2

# Copyright (c) 2025 GeoBenchV2. All rights reserved.
# Licensed under the Apache License 2.0.

"""GeoBench BigEarthNetV2 DataModule."""

import os
from collections.abc import Callable, Sequence
from typing import Any, Literal

import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
import tacoreader
import torch
import torch.nn as nn
from einops import rearrange
from torchgeo.datasets.utils import percentile_normalization

from geobench_v2.datasets import GeoBenchBENV2

from .base import GeoBenchClassificationDataModule


[docs] class GeoBenchBENV2DataModule(GeoBenchClassificationDataModule): """GeoBench BigEarthNetV2 Data Module."""
[docs] def __init__( self, img_size: int = 120, band_order: Sequence[float | str] | dict[str, Sequence[float | str]] = GeoBenchBENV2.band_default_order, batch_size: int = 32, eval_batch_size: int = 64, num_workers: int = 0, collate_fn: Callable | None = None, train_augmentations: nn.Module | None = None, eval_augmentations: nn.Module | None = None, pin_memory: bool = False, **kwargs: Any, ) -> None: """Initialize GeoBench BigEarthNetV2 dataset module. Args: img_size: Image size band_order: band order batch_size: Batch size eval_batch_size: Evaluation batch size num_workers: Number of workers collate_fn: Collate function eval_augmentations: augmentations for validation and test splits train_augmentations: augmentations for train split pin_memory: Pin memory **kwargs: Additional keyword arguments for :class:`geobench_v2.datasets.benv2.GeoBenchBENV2` """ super().__init__( dataset_class=GeoBenchBENV2, img_size=img_size, band_order=band_order, batch_size=batch_size, eval_batch_size=eval_batch_size, num_workers=num_workers, collate_fn=collate_fn, train_augmentations=train_augmentations, eval_augmentations=eval_augmentations, pin_memory=pin_memory, **kwargs, )
[docs] def load_metadata(self) -> pd.DataFrame: """Load metadata file. Returns: pandas DataFrame with metadata. """ self.data_df = tacoreader.load( [os.path.join(self.kwargs["root"], f) for f in GeoBenchBENV2.paths] ) return self.data_df
[docs] def visualize_batch( self, batch: dict[str, Any] | None = None, split: str = "train" ) -> tuple[Any, dict[str, Any]]: """Visualize a batch of data. Args: batch: Optional batch of data. If not provided, a batch will be fetched from the dataloader. split: One of 'train', 'validation', 'test' Returns: The matplotlib figure and the batch of data Raises: AssertionError: If bands needed for plotting are missing """ if split == "train": batch = next(iter(self.train_dataloader())) elif split == "validation": batch = next(iter(self.val_dataloader())) else: batch = next(iter(self.test_dataloader())) if hasattr(self.data_normalizer, "unnormalize"): batch = self.data_normalizer.unnormalize(batch) batch_size = batch["label"].shape[0] n_samples = min(8, batch_size) indices = torch.randperm(batch_size)[:n_samples] modalities = {} for mod in self.band_order.keys(): mod_plot_bands = self.dataset_band_config.modalities[mod].plot_bands missing_bands = [ band for band in mod_plot_bands if band not in self.band_order[mod] ] if missing_bands: raise AssertionError( f"Plotting bands {missing_bands} for modality '{mod}' not found in band_order {self.band_order[mod]}" ) # Get plot indices for bands that exist mod_plot_indices = [ self.band_order[mod].index(band) for band in mod_plot_bands ] mod_images = batch[f"image_{mod}"][:, mod_plot_indices, :, :][indices] mod_images = rearrange(mod_images, "b c h w -> b h w c").cpu().numpy() modalities[mod] = mod_images num_modalities = len(modalities) fig = plt.figure(figsize=(num_modalities * 4 + 2, 3 * n_samples)) gs = fig.add_gridspec( n_samples, num_modalities + 1, width_ratios=[*[1] * num_modalities, 0.4] ) labels = batch["label"][indices] sample_labels = [] for i in range(n_samples): present_labels = torch.where(labels[i] == 1)[0].cpu().tolist() sample_labels.append(present_labels) for i in range(n_samples): for j, (mod, modality_img) in enumerate(modalities.items()): ax = fig.add_subplot(gs[i, j]) plot_img = modality_img[i] if mod == "s1": vv = plot_img[..., 0] vh = plot_img[..., 1] vv = percentile_normalization(vv, lower=2, upper=98) vh = percentile_normalization(vh, lower=2, upper=98) ratio = np.divide(vv, vh, out=np.zeros_like(vv), where=vh != 0) vv = np.clip(vv / 0.3, a_min=0, a_max=1) vh = np.clip(vh / 0.05, a_min=0, a_max=1) ratio = np.clip(ratio / 25, a_min=0, a_max=1) img = np.stack((vv, vh, ratio), axis=2) else: img = percentile_normalization(plot_img, lower=2, upper=98) ax.imshow(img) ax.set_title(f"{mod} image" if i == 0 else "", fontsize=20) ax.axis("off") label_ax = fig.add_subplot(gs[i, -1]) label_ax.axis("off") label_names = [f"- {self.class_names[label]}" for label in sample_labels[i]] label_text = "\n".join(label_names) label_ax.text( 0.05, 0.5, label_text, ha="left", va="center", fontsize=9, bbox=dict( boxstyle="round,pad=0.5", facecolor="lightyellow", alpha=0.8, edgecolor="lightgray", ), transform=label_ax.transAxes, wrap=True, ) if i == 0: label_ax.set_title("Labels", fontsize=15) plt.tight_layout() plt.subplots_adjust(bottom=0.1) return fig, batch
[docs] def visualize_geospatial_distribution( self, split_column: str = "tortilla:data_split", buffer_degrees: float = 5.0, sample_fraction: float | None = None, scale: Literal["10m", "50m", "110m"] = "50m", alpha: float = 0.5, s: float = 0.5, ) -> plt.Figure: """Visualize the geospatial distribution of dataset samples on a map. Args: split_column: Column name in the metadata DataFrame that indicates the dataset split. buffer_degrees: Buffer around the data extent in degrees. sample_fraction: Optional fraction of samples to plot (0.0-1.0) for performance with large datasets. scale: Scale of cartopy features (e.g., '10m', '50m', '110m'). alpha: Transparency of plotted points. s: Size of plotted points. """ return super().visualize_geospatial_distribution( split_column=split_column, buffer_degrees=buffer_degrees, sample_fraction=sample_fraction, scale=scale, alpha=alpha, s=s, )